BLAST options
query
database
blastn
DNA
blastp
protein
blastx
translasted DNA
tblastn
translated DNA
tblastx
working on protein level gets better matches -> prefered
less matches by chance (21AS > 4B)
Histone H1
highly conserved protein in eukaryotes
GO
molecular function
cellular component
biological process
PAML
pylogentic analysis using mximum likelihood
hard to use
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