What are causes of unfolded protein response?
normal (physioligical) conditions
environmental stresses
metabolic stresses
aging
cancer
what are physioligical conditions for unfolded / missfolded proteins?
inefficient protein biogenesis
mutant proteins
excess of unassembled subunits of oligomeric complexes
inefficient translocated precursor protein
What are environmental related stresses?
elevted temperatures
exposure to chemicals
viran and bacterial infections
tissue injury
what are metabolic stresses?
nutrient imbalance
production of ROS
mitochrondrial dysregulation
what is the cause for cancer?
high cell division and mutation rates
what is the cause for aging?
gradudal decrease of protein homeostasis capacity
accumulation of mutated and oxidatively damaged proteins
Protein aggregation > toxicity > cell death
how does the regulation of UPR in organelles work?
how do unfolded proteins response in the ER?
sensing
signal transmission
trasnciption factor
genes related to protein folding and degradation
what is the IRE1 UPR system?
what are the functional domains of IRE1?
how is IRE1 activated?
what is the ATF6/bZIP28 UPR system?
bzip has to be syntheiszed in the ER and has a TM donaun
happens at protein lebel
how does the PERK pathway work?
has no TF and no RNAse activity
Phosphorylation of elF2a
inhibition of elF2B
Reduced elF2: Reduction of protein load in ER
what are strategies to deal with ER stress?
Chaperones
Increase ERAD
Reduce protein load
Expand ER
how are the mammalian UPR arms organized?
how does the evolution of UOR look like?
in primates: IRE, PERK and ATF
animals: IRE, PEK and Atf
funghi: ire
how are aggregated handled?
HSP100 and resolubilization
degradation (autophagy, proteosomal degredation)
what roles play UPR in mammals?
Plasma Cells:
Differentiation of B cells into antibody secreting plasma cells is accompanied by a large expansion of the ER
Atf6 is activated during plasma cell differentiation but PERK is inactive
Customization of UPR so that ER expansion accomodates sustained high levels of secretion t´rather than a need to limit the protein folding burden via translationa repression
Pancreatic cells
beta cells of the endocrine pancreas are responsible for secreting insulin in response ti glucose
ß-cells appear to be heavily reliant on PERK
how does the autophagy work?
how does Folding work?
Import
Chaperone bindig
Glycosilation
Folding
how does ERAD work?
recognition
ubiquitination
retrotranslocation
degradation
what are the different UPR systems?
what are mechanisms for the unfolded protein response?
how does the ER chaerones and protein import work?
ERj1 inhibits initiation of protein syntheisis in the absence of BiP
does IRE1 inly work in XBP1?
double role:
activating Bzip60
degreade ER localized mRNA
= less protein translation
how does the IRE1-dependent decay of MRNA work?
what is the matter of space?
increasing ER size through membrane syntheis is an integral yet distinct part of the cellular program to overcome ER stress
what is the UPR and immune response?
XBP1-deficent B cells are unable to differentiate into antobody-producing plasma cells
antibody secretion is directly dependent on XBP1 splicing is stimulared B cells
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